bionty.BioSample

class bionty.BioSample(organism=None, source=None, version=None, **kwargs)

Bases: PublicOntology

BioSample attributes.

1. NCBI BioSample Attributes https://www.ncbi.nlm.nih.gov/biosample/docs/attributes

Parameters:

• organism (Optional[Literal['all']], default: None) – name of Organism entity.

• source (Optional[Literal['ncbi']], default: None) – The key of the source in the local.yml versions file. Get all available databases with bionty.display_available_sources.

• version (Optional[str], default: None) – The version of the ontology. Typically a date or an actual version. Get available versions with bionty.display_available_sources.

Attributes

fields property

All PublicOntology entity fields.

organism property

The name of Organism.

source property

Name of the source.

version property

Version of the source.